fix a few dead links
* Links in `Input` missed a refactor
* `Reflect::downcast` can't use the intra doc link format, as it's not a link to a trait function, but to a function implemented on `dyn Reflect`
noticed in https://github.com/bevyengine/bevy/pull/1781#discussion_r619777879
related to #1700
This PR:
* documents all methods on `Input<T>`
* adds documentation on the struct about how to use it, and how to implement it for a new input type
* renames method `update` to a easier to understand `clear`
* adds two methods to check for state and clear it after, allowing easier use in the case of #1700
Co-authored-by: Carter Anderson <mcanders1@gmail.com>